Add bench k-nucleotide as per
http://benchmarksgame.alioth.debian.org/u64q/knucleotide.html
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CC=cc -std=c11
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CXX=c++ -std=c++11
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CFLAGS=-O2 -march=native -Wall
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CPPFLAGS=-I../..
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all: k-nucleotide
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k-nucleotide: k-nucleotide.exe data.txt
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time ./k-nucleotide.exe < data.txt
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k-nucleotide.exe: nucleotide.c
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$(CC) $(CFLAGS) $(CPPFLAGS) nucleotide.c -o k-nucleotide.exe -lpthread
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data.txt: fasta.exe
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./fasta.exe 25000000 > data.txt
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fasta.exe: fasta.c
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$(CC) $(CFLAGS) $(CPPFLAGS) -fopenmp fasta.c -o fasta.exe
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clean:
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rm -f *.exe *~ *.o data.txt
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